Phylogenomics tools and databases for the scientific community

PHYLOFACTS Phylogenomic Encyclopedias of Protein Families
FUNCTIONAL SITE PREDICTION Protein functional site prediction using the INTREPID and Discern algorithms
SATCHMO-JS Simultaneous alignment and tree construction using HMMs
RESEARCH Find out about research being done at the lab
AFFILIATIONS Our Affiliations and Collaborators
SOFTWARE Research software available for download, including source code
DATA PhyloFacts alignments, trees, and HMMs available for download
COURSES Bioinformatics courses offered
PEOPLE Meet members of the Berkeley Phylogenomics Group